Transcript: ENST00000557043.1 TCL1A-007

Description

T-cell leukemia/lymphoma 1A [Source:HGNC Symbol;Acc:11648]

Gene Synonyms

TCL1

Location

Chromosome 14: 96,176,513-96,179,059 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 6 domains and features, is associated with 1328 variant alleles and maps to 355 oligo probes.

Gene

This transcript is a product of gene ENSG00000100721.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000402399.1	TCL1A-201	1395	114aa	ENSP00000385036.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9941	P56279	NM_021966.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000554012.1	TCL1A-001	1391	114aa	ENSP00000451506.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9941	P56279	NM_001098725.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000557043.1	TCL1A-007	980	89aa	ENSP00000452028.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000556450.1	TCL1A-005	872	114aa	ENSP00000450701.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9941	P56279	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000555202.1	TCL1A-002	717	114aa	ENSP00000450496.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9941	P56279	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000554119.1	TCL1A-006	913	46aa	ENSP00000450997.1	Nonsense mediated decay		G3V4T4	-	-
ENST00000556156.1	TCL1A-004	882	46aa	ENSP00000451322.1	Nonsense mediated decay		G3V4T4	-	-
ENST00000555886.1	TCL1A-003	813	46aa	ENSP00000451973.1	Nonsense mediated decay		G3V4T4	-	-
ENST00000553467.1	TCL1A-008	368	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 980 bps, Translation length: 89 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000557043.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000413247 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000557043.1 TCL1A-007

Summary