Transcript: ENST00000216492.5 CHGA-001

Description

chromogranin A (parathyroid secretory protein 1) [Source:HGNC Symbol;Acc:1929]

Gene Synonyms

CGA

Location

About this transcript

This transcript has 8 exons, is annotated with 14 domains and features, is associated with 5538 variant alleles and maps to 428 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000216492.5	CHGA-001	2063	457aa	ENSP00000216492.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9906	P10645	NM_001275.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000334654.4	CHGA-003	1474	306aa	ENSP00000334023.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G5E968 Q86T07	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000556076.1	CHGA-004	896	38aa	ENSP00000450801.1	Nonsense mediated decay		G3V2Q7	-	-
ENST00000553866.1	CHGA-005	889	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000556876.1	CHGA-007	912	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000556098.1	CHGA-006	638	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 2,063 bps, Translation length: 457 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P10645

CCDS

This transcript is a member of the Human CCDS set: CCDS9906

Version

ENST00000216492.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000412411 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.