Transcript: ENST00000382542.1 GZMB-202

Description

granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1) [Source:HGNC Symbol;Acc:4709]

Gene Synonyms

CCPI, CGL-1, CGL1, CSP-B, CSPB, CTLA1, CTSGL1, GRB, HLP, SECT

Location

Chromosome 14: 25,100,177-25,103,473 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 16 domains and features, is associated with 1897 variant alleles and maps to 314 oligo probes.

Gene

This transcript is a product of gene ENSG00000100453.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000216341.4	GZMB-001	968	247aa	ENSP00000216341.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9633	P10144	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000382542.1	GZMB-202	951	281aa	ENSP00000371982.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KPK2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000415355.3	GZMB-003	923	235aa	ENSP00000387385.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KQ52	NM_004131.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000526004.1	GZMB-005	819	90aa	ENSP00000434213.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PRD7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000382540.1	GZMB-201	816	202aa	ENSP00000371980.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EUV0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000530830.1	GZMB-006	772	44aa	ENSP00000435084.1	Nonsense mediated decay		E9PLX4	-	-
ENST00000554242.1	GZMB-007	665	90aa	ENSP00000450535.1	Nonsense mediated decay		E9PRD7	-	-
ENST00000532263.1	GZMB-004	517	35aa	ENSP00000432074.1	Nonsense mediated decay		E9PID1	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 951 bps, Translation length: 281 residues

Version

ENST00000382542.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Stop codons

This transcript has a variant, rs2273844, that causes a stop codon to be gained in at least 10% of HapMap or 1000 Genome population(s) CSHL-HAPMAP:HapMap-CEU, CSHL-HAPMAP:HAPMAP-GIH, ESP6500:European_American, CSHL-HAPMAP:HAPMAP-ASW, CSHL-HAPMAP:HapMap-JPT, CSHL-HAPMAP:HAPMAP-MKK, CSHL-HAPMAP:HAPMAP-TSI, CSHL-HAPMAP:HAPMAP-LWK, CSHL-HAPMAP:HapMap-HCB, ESP6500:African_American, CSHL-HAPMAP:HapMap-YRI, CSHL-HAPMAP:HAPMAP-CHD.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000382542.1 GZMB-202

Summary