Transcript: ENST00000216252.3 PHF5A-001

Description

PHD finger protein 5A [Source:HGNC Symbol;Acc:18000]

Gene Synonyms

INI, MGC1346, Rds3, SAP14b, SF3b14b, bK223H9.2

Location

About this transcript

This transcript has 4 exons, is annotated with 3 domains and features, is associated with 4208 variant alleles and maps to 255 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000216252.3	PHF5A-001	1086	110aa	ENSP00000216252.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14016	Q7RTV0	NM_032758.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000491254.1	PHF5A-003	292	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000459687.1	PHF5A-002	504	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 1,086 bps, Translation length: 110 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q7RTV0

CCDS

This transcript is a member of the Human CCDS set: CCDS14016

Version

ENST00000216252.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000320686 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.