Transcript: ENST00000402077.3 KCTD17-001

Description

potassium channel tetramerization domain containing 17 [Source:HGNC Symbol;Acc:25705]

Gene Synonyms

FLJ12242

Location

Chromosome 22: 37,447,779-37,459,430 forward strand.

About this transcript

This transcript has 8 exons, is annotated with 9 domains and features, is associated with 5368 variant alleles and maps to 372 oligo probes.

Gene

This transcript is a product of gene ENSG00000100379.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000403888.3	KCTD17-002	1763	321aa	ENSP00000385096.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8N5Z5	NM_001282684.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000402077.3	KCTD17-001	1691	297aa	ENSP00000384391.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13940	Q8N5Z5	NM_024681.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000456470.1	KCTD17-003	1438	180aa	ENSP00000409638.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	NM_001282685.1	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000431531.1	KCTD17-009	559	63aa	ENSP00000402434.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B0QYB2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000421900.1	KCTD17-007	451	104aa	ENSP00000409116.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000462640.1	KCTD17-006	808	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000478231.1	KCTD17-008	584	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000483389.1	KCTD17-005	546	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 1,691 bps, Translation length: 297 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8N5Z5

CCDS

This transcript is a member of the Human CCDS set: CCDS13940

Version

ENST00000402077.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000318780 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000402077.3 KCTD17-001

Summary