Transcript: ENST00000450579.1 PRODH-010

Description

proline dehydrogenase (oxidase) 1 [Source:HGNC Symbol;Acc:9453]

Gene Synonyms

HSPOX2, PIG6, POX, POX2, PRODH1, PRODH2, TP53I6

Location

Chromosome 22: 18,909,885-18,922,341 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 4 domains and features, is associated with 2868 variant alleles and maps to 221 oligo probes.

Gene

This transcript is a product of gene ENSG00000100033.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000357068.6	PRODH-001	2462	600aa	ENSP00000349577.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13754	C9JIW4 E7EQL6 O43272	NM_016335.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000420436.1	PRODH-004	2034	492aa	ENSP00000410805.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56223	C9JIW4 E7EQL6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000334029.2	PRODH-002	1985	492aa	ENSP00000334726.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56223	C9JIW4 E7EQL6	NM_001195226.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000450579.1	PRODH-010	594	135aa	ENSP00000396806.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JIW4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000438924.1	PRODH-011	553	185aa	ENSP00000409742.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000457083.1	PRODH-009	491	164aa	ENSP00000413941.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000609229.1	PRODH-014	4739	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000482858.1	PRODH-005	4676	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000491604.1	PRODH-003	3106	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000313755.5	PRODH-007	2961	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000429300.1	PRODH-006	2567	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000496625.1	PRODH-013	632	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000399694.1	PRODH-012	472	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000446371.1	PRODH-008	441	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 594 bps, Translation length: 135 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000450579.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Stop codons

This transcript has a variant, rs11913840, that causes a stop codon to be gained in at least 10% of HapMap or 1000 Genome population(s) ESP6500:African_American.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000316646 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000450579.1 PRODH-010

Summary