Transcript: ENST00000215574.4 CDC34-001

Description

cell division cycle 34 [Source:HGNC Symbol;Acc:1734]

Gene Synonyms

E2-CDC34, UBC3, UBCH3, UBE2R1

Location

Chromosome 19: 531,714-542,092 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 10 domains and features, is associated with 7415 variant alleles and maps to 420 oligo probes.

Gene

This transcript is a product of gene ENSG00000099804.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000215574.4	CDC34-001	1469	236aa	ENSP00000215574.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12030	P49427	NM_004359.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000586283.2	CDC34-007	945	136aa	ENSP00000475282.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		U3KPV8	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000606136.1	CDC34-011	612	137aa	ENSP00000475730.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000606065.1	CDC34-012	560	119aa	ENSP00000475610.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		U3KQ77	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000607527.1	CDC34-008	348	104aa	ENSP00000476107.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		U3KQP9	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000607629.1	CDC34-009	330	102aa	ENSP00000475607.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000593036.2	CDC34-006	281	8aa	ENSP00000476207.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000606400.1	CDC34-010	595	71aa	ENSP00000476129.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000586788.1	CDC34-002	900	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,469 bps, Translation length: 236 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P49427

CCDS

This transcript is a member of the Human CCDS set: CCDS12030

Version

ENST00000215574.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000451889 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000215574.4 CDC34-001

Summary