Transcript: ENST00000370558.4 SH3GLB1-001

Description

SH3-domain GRB2-like endophilin B1 [Source:HGNC Symbol;Acc:10833]

Gene Synonyms

Bif-1, CGI-61, KIAA0491, PPP1R70, dJ612B15.2

Location

About this transcript

This transcript has 9 exons, is annotated with 15 domains and features, is associated with 18066 variant alleles and maps to 559 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000482504.1	SH3GLB1-002	1199	386aa	ENSP00000418744.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55612	Q9Y371	NM_001206652.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000370558.4	SH3GLB1-001	6371	365aa	ENSP00000473267.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS710	Q9Y371	NM_016009.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000535010.1	SH3GLB1-201	1392	265aa	ENSP00000441355.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55613	Q9Y371	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000602603.1	SH3GLB1-003	584	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 6,371 bps, Translation length: 365 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Y371

CCDS

This transcript is a member of the Human CCDS set: CCDS710

Version

ENST00000370558.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000028287 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.