Transcript: ENST00000379388.2 HIVEP1-001

Description

human immunodeficiency virus type I enhancer binding protein 1 [Source:HGNC Symbol;Acc:4920]

Gene Synonyms

CIRIP, CRYBP1, MBP-1, PRDII-BF1, Schnurri-1, ZAS1, ZNF40, ZNF40A

Location

Chromosome 6: 12,012,571-12,165,232 forward strand.

About this transcript

This transcript has 9 exons, is annotated with 35 domains and features, is associated with 67258 variant alleles and maps to 600 oligo probes.

Gene

This transcript is a product of gene ENSG00000095951.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000379388.2	HIVEP1-001	9027	2718aa	ENSP00000368698.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43426	C9J2N3 C9JAW2 C9JZF8 P15822	NM_002114.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000541134.1	HIVEP1-201	2085	583aa	ENSP00000445617.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H212	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000484210.1	HIVEP1-007	1602	47aa	ENSP00000419721.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JZV1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000442081.2	HIVEP1-002	1044	240aa	ENSP00000409078.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JLG1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000487103.1	HIVEP1-005	585	142aa	ENSP00000417348.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J2N3 C9JAW2 C9JZF8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000491710.1	HIVEP1-004	579	120aa	ENSP00000419762.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JZF8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000478545.1	HIVEP1-006	576	128aa	ENSP00000418021.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JAW2 C9JZF8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000399469.2	HIVEP1-003	2085	43aa	ENSP00000382395.2	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 9, Coding exons: 8, Transcript length: 9,027 bps, Translation length: 2,718 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P15822

CCDS

This transcript is a member of the Human CCDS set: CCDS43426

Version

ENST00000379388.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000039870 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000379388.2 HIVEP1-001

Summary