Transcript: ENST00000216297.2 SUPT16H-001

Description

suppressor of Ty 16 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:11465]

Gene Synonyms

CDC68, FACT, FACT140, FACTP140, FLJ10857, FLJ14010, SPT16/CDC68

Location

Chromosome 14: 21,819,631-21,852,425 reverse strand.

About this transcript

This transcript has 26 exons, is annotated with 19 domains and features, is associated with 15054 variant alleles and maps to 834 oligo probes.

Gene

This transcript is a product of gene ENSG00000092201.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000216297.2	SUPT16H-001	4684	1047aa	ENSP00000216297.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9569	Q9Y5B9	NM_007192.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000555943.1	SUPT16H-003	915	83aa	ENSP00000450910.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V2X0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000557652.1	SUPT16H-005	877	81aa	ENSP00000451517.1	Nonsense mediated decay		G3V401	-	-
ENST00000556309.1	SUPT16H-006	582	66aa	ENSP00000452259.1	Nonsense mediated decay		G3V5A4	-	-
ENST00000557394.1	SUPT16H-004	2324	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000556217.1	SUPT16H-007	1027	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000555752.1	SUPT16H-002	888	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000552829.2	SUPT16H-008	669	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 26, Coding exons: 26, Transcript length: 4,684 bps, Translation length: 1,047 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Y5B9

CCDS

This transcript is a member of the Human CCDS set: CCDS9569

Version

ENST00000216297.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000074025 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000216297.2 SUPT16H-001

Summary