Transcript: ENST00000340010.5 SLC26A3-002

Description

solute carrier family 26 (anion exchanger), member 3 [Source:HGNC Symbol;Acc:3018]

Gene Synonyms

CLD, DRA

Location

About this transcript

This transcript has 21 exons, is annotated with 28 domains and features, is associated with 18183 variant alleles and maps to 578 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000340010.5	SLC26A3-002	2863	764aa	ENSP00000345873.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5748	C9JFJ2 P40879 Q75N04	NM_000111.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000422236.2	SLC26A3-201	2601	651aa	ENSP00000415817.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G5E9U3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000453332.1	SLC26A3-003	552	120aa	ENSP00000395955.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JFJ2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000379083.3	SLC26A3-001	2602	52aa	ENSP00000368375.3	Nonsense mediated decay		F8WBL6	-	-
ENST00000469651.1	SLC26A3-006	646	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000468551.1	SLC26A3-005	556	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 21, Coding exons: 20, Transcript length: 2,863 bps, Translation length: 764 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P40879

CCDS

This transcript is a member of the Human CCDS set: CCDS5748

Version

ENST00000340010.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000337190 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.