Transcript: ENST00000204679.4 GNPTG-001

Description

N-acetylglucosamine-1-phosphate transferase, gamma subunit [Source:HGNC Symbol;Acc:23026]

Gene Synonyms

C16orf27, CAB56184, GNPTAG, LP2537, RJD9, c316G12.3

Location

Chromosome 16: 1,401,924-1,413,352 forward strand.

About this transcript

This transcript has 11 exons, is annotated with 8 domains and features, is associated with 7993 variant alleles and maps to 401 oligo probes.

Gene

This transcript is a product of gene ENSG00000090581.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000204679.4	GNPTG-001	1221	305aa	ENSP00000204679.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10436	Q96RZ2 Q9UJJ9	NM_032520.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000529110.1	GNPTG-009	552	184aa	ENSP00000435349.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000526820.1	GNPTG-004	572	76aa	ENSP00000434413.1	Nonsense mediated decay		E9PQQ5	-	-
ENST00000527876.1	GNPTG-006	550	76aa	ENSP00000460728.1	Nonsense mediated decay		E9PQQ5	-	-
ENST00000527076.1	GNPTG-003	2400	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000527168.1	GNPTG-002	1317	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000529957.1	GNPTG-007	922	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000527137.1	GNPTG-008	718	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000534197.1	GNPTG-005	420	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 1,221 bps, Translation length: 305 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UJJ9

CCDS

This transcript is a member of the Human CCDS set: CCDS10436

Version

ENST00000204679.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000109058 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000204679.4 GNPTG-001

Summary