Transcript: ENST00000379333.1 SLC23A2-001

Description

solute carrier family 23 (ascorbic acid transporter), member 2 [Source:HGNC Symbol;Acc:10973]

Gene Synonyms

KIAA0238, NBTL1, SLC23A1, SVCT2, YSPL2

Location

About this transcript

This transcript has 17 exons, is annotated with 16 domains and features, is associated with 67426 variant alleles and maps to 727 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000379333.1	SLC23A2-001	6962	650aa	ENSP00000368637.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13085	Q4ZGM1 Q9UGH3	NM_203327.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000338244.1	SLC23A2-002	6944	650aa	ENSP00000344322.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13085	Q4ZGM1 Q9UGH3	NM_005116.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000424750.2	SLC23A2-201	2375	536aa	ENSP00000406601.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DJZ1 Q4ZGM1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000423430.1	SLC23A2-004	911	304aa	ENSP00000396364.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000468355.1	SLC23A2-003	1934	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000496331.1	SLC23A2-005	761	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 17, Coding exons: 15, Transcript length: 6,962 bps, Translation length: 650 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UGH3

CCDS

This transcript is a member of the Human CCDS set: CCDS13085

Version

ENST00000379333.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000077832 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.