Transcript: ENST00000338074.2 EPB41L1-008

Description

erythrocyte membrane protein band 4.1-like 1 [Source:HGNC Symbol;Acc:3378]

Gene Synonyms

4.1N, KIAA0338, MRD11

Location

Chromosome 20: 34,742,672-34,820,721 forward strand.

About this transcript

This transcript has 22 exons, is annotated with 32 domains and features, is associated with 29937 variant alleles and maps to 815 oligo probes.

Gene

This transcript is a product of gene ENSG00000088367.16 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000338074.2	EPB41L1-008	6266	881aa	ENSP00000337168.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13271	Q4VXN0 Q4VXN1 Q4VXN2 Q4VXN5 Q4VXN6 Q4VXN7 Q4VXN8 Q9H4G0	NM_012156.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000441639.1	EPB41L1-202	5863	779aa	ENSP00000399214.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13272	Q4VXN0 Q4VXN1 Q4VXN2 Q9H4G0	NM_177996.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000373946.3	EPB41L1-201	5565	701aa	ENSP00000363057.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58770	Q4VXN0 Q4VXN1 Q4VXN2 Q9H4G0	NM_001258330.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000373950.2	EPB41L1-010	3631	772aa	ENSP00000363061.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q4VXN2 Q9H4G0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000202028.5	EPB41L1-013	3514	779aa	ENSP00000202028.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13272	Q4VXN0 Q4VXN1 Q4VXN2 Q9H4G0	NM_001258331.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000373941.1	EPB41L1-011	2652	880aa	ENSP00000363052.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58771	Q4VXN0 Q4VXN1 Q4VXN2 Q4VXN5 Q4VXN6 Q4VXN7 Q4VXN8 Q9H4G0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000430276.1	EPB41L1-001	896	257aa	ENSP00000404341.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q4VXN0 Q4VXN1 Q4VXN2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000447825.1	EPB41L1-002	896	114aa	ENSP00000396366.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q4VXN2 Q4VXN7 Q4VXN8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000432603.1	EPB41L1-012	864	119aa	ENSP00000390262.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000451082.1	EPB41L1-006	803	268aa	ENSP00000406464.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000452261.1	EPB41L1-004	769	188aa	ENSP00000413262.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q4VXN2 Q4VXN5 Q4VXN6 Q4VXN7 Q4VXN8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000373945.1	EPB41L1-005	763	199aa	ENSP00000363056.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q4VXN1 Q4VXN2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000406771.2	EPB41L1-015	652	168aa	ENSP00000385244.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q4VXN2 Q4VXN6 Q4VXN7 Q4VXN8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000454226.1	EPB41L1-007	593	197aa	ENSP00000388281.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000427533.1	EPB41L1-003	460	59aa	ENSP00000408877.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q4VXN8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000432589.1	EPB41L1-014	210	37aa	ENSP00000393106.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q4VXN2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000479336.1	EPB41L1-009	846	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 22, Coding exons: 21, Transcript length: 6,266 bps, Translation length: 881 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9H4G0

CCDS

This transcript is a member of the Human CCDS set: CCDS13271

Version

ENST00000338074.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000078978 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000338074.2 EPB41L1-008

Summary