Transcript: ENST00000417454.1 GP6-001

Description

glycoprotein VI (platelet) [Source:HGNC Symbol;Acc:14388]

Gene Synonyms

BDPLT11, GPIV, GPVI

Location

About this transcript

This transcript has 8 exons, is annotated with 15 domains and features, is associated with 15108 variant alleles and maps to 346 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000310373.3	GP6-002	2268	620aa	ENSP00000308782.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42626	K7EIW7 Q9HCN6	NM_001083899.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000417454.1	GP6-001	2264	339aa	ENSP00000394922.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46184	K7EIW7 Q9HCN6	NM_016363.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000333884.2	GP6-003	2210	321aa	ENSP00000334552.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58678	K7EIW7 Q9HCN6	NM_001256017.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000468239.1	GP6-005	876	117aa	ENSP00000464922.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EIW7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000465648.1	GP6-004	859	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 2,264 bps, Translation length: 339 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9HCN6

CCDS

This transcript is a member of the Human CCDS set: CCDS46184

Version

ENST00000417454.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000357006 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.