Transcript: ENST00000413411.1 SEPHS1-003

Description

selenophosphate synthetase 1 [Source:HGNC Symbol;Acc:19685]

Gene Synonyms

SELD, SPS, SPS1

Location

Chromosome 10: 13,375,877-13,389,358 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 6 domains and features, is associated with 6896 variant alleles and maps to 120 oligo probes.

Gene

This transcript is a product of gene ENSG00000086475.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000327347.5	SEPHS1-001	3273	392aa	ENSP00000367893.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7098	P49903 Q5T5U6 Q5T5U7	NM_012247.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000545675.1	SEPHS1-202	2689	324aa	ENSP00000441119.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P49903 Q5T5U6 Q5T5U7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000378614.4	SEPHS1-002	2387	321aa	ENSP00000367877.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55703	P49903 Q5T5U6 Q5T5U7	NM_001195604.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000537130.1	SEPHS1-201	1569	325aa	ENSP00000442768.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55702	P49903 Q5T5U7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000413411.1	SEPHS1-003	660	166aa	ENSP00000401732.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T5U6 Q5T5U7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000425947.1	SEPHS1-004	383	91aa	ENSP00000400418.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T5U7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000494329.1	SEPHS1-005	796	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 660 bps, Translation length: 166 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000413411.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000046858 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000413411.1 SEPHS1-003

Summary