Transcript: ENST00000416246.1 SNX10-005

Description

sorting nexin 10 [Source:HGNC Symbol;Acc:14974]

Gene Synonyms

OPTB8

Location

Chromosome 7: 26,331,541-26,411,642 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 8 domains and features, is associated with 33424 variant alleles and maps to 362 oligo probes.

Gene

This transcript is a product of gene ENSG00000086300.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000338523.4	SNX10-002	2546	201aa	ENSP00000343709.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5399	G5E9H5 Q75MD2 Q75MY3 Q9Y5X0	NM_013322.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000396376.1	SNX10-001	2491	201aa	ENSP00000379661.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5399	G5E9H5 Q75MD2 Q75MY3 Q9Y5X0	NM_001199837.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409838.1	SNX10-004	944	117aa	ENSP00000386540.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56470	Q75MY3 Q9Y5X0	NM_001199838.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000446848.2	SNX10-201	880	227aa	ENSP00000395474.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DJM0 C9JQ16 C9JUQ6 G5E9H5 Q75MY3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000416246.1	SNX10-005	823	197aa	ENSP00000408164.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JQ16 C9JUQ6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000409367.1	SNX10-007	746	161aa	ENSP00000387274.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G5E9H5 Q75MY3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000412416.1	SNX10-006	429	53aa	ENSP00000393690.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JUQ6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000462993.1	SNX10-003	806	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 5, Transcript length: 823 bps, Translation length: 197 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000416246.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000327999 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000416246.1 SNX10-005

Summary