Transcript: ENST00000380649.3 HADHA-001

Description

hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit [Source:HGNC Symbol;Acc:4801]

Gene Synonyms

ECHA, GBP, HADH, LCEH, LCHAD, MTPA, TP-ALPHA

Location

About this transcript

This transcript has 20 exons, is annotated with 21 domains and features, is associated with 21537 variant alleles and maps to 788 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000380649.3	HADHA-001	3037	763aa	ENSP00000370023.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1721	B4DDZ5 E9KL44 P40939 Q9UQC5	NM_000182.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000457468.2	HADHA-201	1485	260aa	ENSP00000405344.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DYP2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000492433.1	HADHA-004	752	250aa	ENSP00000438039.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YFD6	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000461025.1	HADHA-003	431	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000471743.1	HADHA-002	690	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 20, Coding exons: 20, Transcript length: 3,037 bps, Translation length: 763 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P40939

CCDS

This transcript is a member of the Human CCDS set: CCDS1721

Version

ENST00000380649.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000214051 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.