Transcript: ENST00000233242.1 APOB-001

Description

apolipoprotein B [Source:HGNC Symbol;Acc:603]

Gene Synonyms

FLDB, LDLCQ4

Location

About this transcript

This transcript has 29 exons, is annotated with 33 domains and features, is associated with 24170 variant alleles and maps to 1107 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000233242.1	APOB-001	14121	4563aa	ENSP00000233242.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1703	P04114 Q13828 Q9UE52 Q9UE53 S5FVK9	NM_000384.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000399256.4	APOB-002	3128	828aa	ENSP00000382200.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A8MUN2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 29, Coding exons: 29, Transcript length: 14,121 bps, Translation length: 4,563 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P04114

CCDS

This transcript is a member of the Human CCDS set: CCDS1703

Version

ENST00000233242.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000207571 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.