Transcript: ENST00000283684.4 ATP8B1-001

Description

ATPase, aminophospholipid transporter, class I, type 8B, member 1 [Source:HGNC Symbol;Acc:3706]

Gene Synonyms

ATPIC, BRIC, FIC1, ICP1, PFIC, PFIC1

Location

About this transcript

This transcript has 27 exons, is annotated with 41 domains and features, is associated with 38020 variant alleles and maps to 804 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000536015.1	ATP8B1-201	5935	1251aa	ENSP00000445359.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11965	K7EQC4 K7ERI0 O43520	NM_005603.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000283684.4	ATP8B1-001	5818	1251aa	ENSP00000283684.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11965	K7EQC4 K7ERI0 O43520	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000585322.1	ATP8B1-006	527	11aa	ENSP00000468751.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000588255.1	ATP8B1-003	489	92aa	ENSP00000468266.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ERI0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000591728.1	ATP8B1-005	532	61aa	ENSP00000467767.1	Nonsense mediated decay		K7EQC4	-	-
ENST00000589147.1	ATP8B1-002	540	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 27, Coding exons: 27, Transcript length: 5,818 bps, Translation length: 1,251 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O43520

CCDS

This transcript is a member of the Human CCDS set: CCDS11965

Version

ENST00000283684.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000256097 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.