Transcript: ENST00000515675.1 AFP-004

Description

alpha-fetoprotein [Source:HGNC Symbol;Acc:317]

Gene Synonyms

FETA, HPAFP

Location

About this transcript

This transcript has 3 exons, is associated with 3317 variant alleles and maps to 63 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000395792.2	AFP-001	2484	609aa	ENSP00000379138.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3556	P02771	NM_001134.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000226359.2	AFP-003	1914	622aa	ENSP00000226359.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KMX3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000506820.1	AFP-008	476	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000515675.1	AFP-004	317	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000513720.1	AFP-005	197	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000508838.1	AFP-006	728	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000514279.1	AFP-007	693	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 317 bps,

Version

ENST00000515675.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000365432 (version 1)