Transcript: ENST00000373664.3 RBL1-001

Description

retinoblastoma-like 1 (p107) [Source:HGNC Symbol;Acc:9893]

Gene Synonyms

CP107, PRB1, cp107, p107

Location

About this transcript

This transcript has 22 exons, is annotated with 15 domains and features, is associated with 45337 variant alleles and maps to 807 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000373664.3	RBL1-001	5684	1068aa	ENSP00000362768.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13289	P28749	NM_002895.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000344359.3	RBL1-002	3225	1014aa	ENSP00000343646.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13290	P28749	NM_183404.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000525052.1	RBL1-004	763	254aa	ENSP00000434711.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000527999.1	RBL1-003	599	113aa	ENSP00000437240.1	Nonsense mediated decay		E9PNB6	-	-

Summary

Statistics

Exons: 22, Coding exons: 22, Transcript length: 5,684 bps, Translation length: 1,068 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P28749

CCDS

This transcript is a member of the Human CCDS set: CCDS13289

Version

ENST00000373664.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000079067 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.