Transcript: ENST00000264828.3 COL5A3-001

Description

collagen, type V, alpha 3 [Source:HGNC Symbol;Acc:14864]

Location

About this transcript

This transcript has 67 exons, is annotated with 43 domains and features, is associated with 28631 variant alleles and maps to 1557 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000264828.3	COL5A3-001	6174	1745aa	ENSP00000264828.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12222	P25940	NM_015719.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000461214.1	COL5A3-002	828	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 67, Coding exons: 67, Transcript length: 6,174 bps, Translation length: 1,745 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P25940

CCDS

This transcript is a member of the Human CCDS set: CCDS12222

Version

ENST00000264828.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000315788 (version 1)

Annotation Attributes

dotter confirmed [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.