Transcript: ENST00000484842.1 OPHN1-004

Description

oligophrenin 1 [Source:HGNC Symbol;Acc:8148]

Gene Synonyms

ARHGAP41, MRX60, OPN1

Location

About this transcript

This transcript has 5 exons, is associated with 14064 variant alleles and maps to 105 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000355520.5	OPHN1-001	7879	802aa	ENSP00000347710.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14388	O60890 Q7Z2H1	NM_002547.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000540071.1	OPHN1-201	2959	694aa	ENSP00000438617.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H2E3 Q7Z2H1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000484842.1	OPHN1-004	774	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000467444.1	OPHN1-002	737	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000491714.1	OPHN1-005	377	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000486068.1	OPHN1-003	120	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 774 bps,

Version

ENST00000484842.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000057014 (version 1)