Transcript: ENST00000378609.4 GNB1-001

Description

guanine nucleotide binding protein (G protein), beta polypeptide 1 [Source:HGNC Symbol;Acc:4396]

Location

Chromosome 1: 1,716,729-1,822,495 reverse strand.

About this transcript

This transcript has 12 exons, is annotated with 37 domains and features, is associated with 54015 variant alleles and maps to 669 oligo probes.

Gene

This transcript is a product of gene ENSG00000078369.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000378609.4	GNB1-001	3128	340aa	ENSP00000367872.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34	B1AKQ8 B3KVK2 F6UT28 P62873 Q71UM6 Q71UM7	NM_002074.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000434686.2	GNB1-007	684	165aa	ENSP00000392765.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1AKQ8 F6UT28	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000439272.2	GNB1-005	602	163aa	ENSP00000399741.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F6X3N5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000437146.1	GNB1-006	423	107aa	ENSP00000416651.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1AKQ8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000472614.2	GNB1-008	708	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000461893.1	GNB1-003	2438	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000471354.1	GNB1-002	1512	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000607589.1	GNB1-009	567	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 9, Transcript length: 3,128 bps, Translation length: 340 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P62873

CCDS

This transcript is a member of the Human CCDS set: CCDS34

Version

ENST00000378609.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000002762 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000378609.4 GNB1-001

Summary