Transcript: ENST00000448120.2 TULP3-001

Description

tubby like protein 3 [Source:HGNC Symbol;Acc:12425]

Gene Synonyms

TUBL3

Location

Chromosome 12: 3,000,063-3,050,306 forward strand.

About this transcript

This transcript has 11 exons, is annotated with 19 domains and features, is associated with 24043 variant alleles and maps to 715 oligo probes.

Gene

This transcript is a product of gene ENSG00000078246.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000448120.2	TULP3-001	3076	442aa	ENSP00000410051.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8519	F5H7B9 O75386	NM_003324.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000397132.2	TULP3-004	1951	501aa	ENSP00000380321.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53737	F5H7B9 F8WBZ9	NM_001160408.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000544943.1	TULP3-005	548	137aa	ENSP00000442631.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H7B9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000541678.1	TULP3-008	542	133aa	ENSP00000441319.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000538704.1	TULP3-007	449	109aa	ENSP00000440364.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000545331.1	TULP3-002	1373	39aa	ENSP00000441599.1	Nonsense mediated decay		F5GWL5	-	-
ENST00000538354.1	TULP3-003	1229	39aa	ENSP00000437899.1	Nonsense mediated decay		F5GWL5	-	-
ENST00000540184.1	TULP3-006	978	170aa	ENSP00000444110.1	Nonsense mediated decay		B7Z6A2	-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 3,076 bps, Translation length: 442 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O75386

CCDS

This transcript is a member of the Human CCDS set: CCDS8519

Version

ENST00000448120.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000398468 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000448120.2 TULP3-001

Summary