Transcript: ENST00000441556.1 CTTNBP2-012

Description

cortactin binding protein 2 [Source:HGNC Symbol;Acc:15679]

Gene Synonyms

C7orf8, CORTBP2, KIAA1758, Orf4

Location

Chromosome 7: 117,350,917-117,513,483 reverse strand.

About this transcript

This transcript has 23 exons, is annotated with 11 domains and features, is associated with 69523 variant alleles and maps to 626 oligo probes.

Gene

This transcript is a product of gene ENSG00000077063.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000160373.3	CTTNBP2-001	5970	1663aa	ENSP00000160373.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5774	C9J720 C9JFC9 C9JVQ6 Q20BG7 Q20BG9 Q8WZ74	NM_033427.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000446636.1	CTTNBP2-011	4250	1151aa	ENSP00000389576.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000435233.1	CTTNBP2-009	580	193aa	ENSP00000395925.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000434890.1	CTTNBP2-002	578	161aa	ENSP00000396014.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J720 C9JFC9 C9JVQ6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000454375.1	CTTNBP2-006	570	136aa	ENSP00000405831.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J720 C9JVQ6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000416239.1	CTTNBP2-004	530	120aa	ENSP00000406142.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000412853.1	CTTNBP2-007	470	95aa	ENSP00000393373.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JVQ6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000441556.1	CTTNBP2-012	5517	640aa	ENSP00000397678.1	Nonsense mediated decay		C9J720 C9JFC9 C9JVQ6 F8WB16	-	-
ENST00000445366.1	CTTNBP2-010	760	47aa	ENSP00000389491.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000487820.1	CTTNBP2-003	379	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000467088.1	CTTNBP2-008	576	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000482124.1	CTTNBP2-005	521	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 23, Coding exons: 5, Transcript length: 5,517 bps, Translation length: 640 residues

Version

ENST00000441556.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000316884 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000441556.1 CTTNBP2-012

Summary