Description
Rho guanine nucleotide exchange factor (GEF) 1 [Source:HGNC Symbol;Acc:681]
Gene Synonyms
GEF1, LBCL2, LSC, P115-RHOGEF, SUB1.5
Location
Chromosome 19: 42,387,228-42,411,595 forward strand.
About this transcript
This transcript has 29 exons, is annotated with 21 domains and features, is associated with 12771 variant alleles and maps to 841 oligo probes.
Gene
This transcript is a product of gene ENSG00000076928.13 Show transcript tableHide transcript table
Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
---|---|---|---|---|---|---|---|---|---|
ENST00000599846.1 | ARHGEF1-010 | 3393 | 968aa | ENSP00000470715.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M0QZR4 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
ENST00000354532.3 | ARHGEF1-005 | 3243 | 912aa | ENSP00000346532.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS12591 | Q92888 | NM_004706.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
ENST00000337665.4 | ARHGEF1-006 | 3171 | 927aa | ENSP00000337261.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS12590 | Q92888 | NM_199002.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
ENST00000347545.4 | ARHGEF1-001 | 3091 | 879aa | ENSP00000344429.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS12592 | Q92888 | NM_198977.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
ENST00000378152.4 | ARHGEF1-007 | 2986 | 948aa | ENSP00000367394.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q6NX52 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
ENST00000599589.1 | ARHGEF1-009 | 2636 | 702aa | ENSP00000469735.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
ENST00000594258.1 | ARHGEF1-017 | 919 | 307aa | ENSP00000470042.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
ENST00000595723.1 | ARHGEF1-022 | 872 | 291aa | ENSP00000472466.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
ENST00000594521.1 | ARHGEF1-015 | 826 | 275aa | ENSP00000470557.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M0QZH8 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
ENST00000594417.1 | ARHGEF1-024 | 769 | 128aa | ENSP00000471942.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
ENST00000598812.1 | ARHGEF1-014 | 588 | 88aa | ENSP00000473229.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
ENST00000600517.1 | ARHGEF1-019 | 428 | 68aa | ENSP00000469409.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
ENST00000596957.1 | ARHGEF1-013 | 570 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
ENST00000594513.1 | ARHGEF1-026 | 325 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
ENST00000600274.1 | ARHGEF1-002 | 3439 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000595897.1 | ARHGEF1-011 | 2973 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000600387.1 | ARHGEF1-012 | 2272 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000594044.1 | ARHGEF1-018 | 834 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000593869.1 | ARHGEF1-016 | 731 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000595770.1 | ARHGEF1-025 | 663 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000593609.1 | ARHGEF1-023 | 576 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000598444.1 | ARHGEF1-021 | 425 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000598587.1 | ARHGEF1-020 | 359 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |