Transcript: ENST00000378860.4 WDR62-002

Description

WD repeat domain 62 [Source:HGNC Symbol;Acc:24502]

Gene Synonyms

C19orf14, DKFZP434J046, FLJ33298, MCPH2

Location

Chromosome 19: 36,545,783-36,565,206 forward strand.

About this transcript

This transcript has 10 exons, is associated with 9536 variant alleles and maps to 319 oligo probes.

Gene

This transcript is a product of gene ENSG00000075702.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000401500.2	WDR62-001	4682	1523aa	ENSP00000384792.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46059	O43379	NM_173636.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000270301.7	WDR62-006	4632	1518aa	ENSP00000270301.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33001	O43379	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000388999.3	WDR62-201	1543	483aa	ENSP00000373651.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		O43379	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000427823.2	WDR62-007	955	318aa	ENSP00000413475.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C3R4	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000587391.1	WDR62-003	5971	483aa	ENSP00000465525.1	Nonsense mediated decay		O43379	-	-
ENST00000378860.4	WDR62-002	1980	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000589953.1	WDR62-005	664	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000608676.1	WDR62-004	2960	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 0, Transcript length: 1,980 bps,

Version

ENST00000378860.4

Type

Processed transcript

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000457433 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000378860.4 WDR62-002

Summary