Transcript: ENST00000331789.5 ACTB-001

Description

actin, beta [Source:HGNC Symbol;Acc:132]

Gene Synonyms

BRWS1, PS1TP5BP1

Location

Chromosome 7: 5,566,782-5,570,340 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 18 domains and features, is associated with 3758 variant alleles and maps to 1617 oligo probes.

Gene

This transcript is a product of gene ENSG00000075624.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000331789.5	ACTB-001	1917	375aa	ENSP00000349960.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5341	A1E282 A4UCT3 A5GZ75 B3KWQ3 B4E335 C9JTX5 C9JZR7 E7EVS6 P60709 Q1KLZ0 Q562Z7 Q6PJ43 Q96DE1 Q96FU6 Q9UE89	NM_001101.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000443528.1	ACTB-009	569	102aa	ENSP00000393951.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JTX5 C9JZR7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000432588.1	ACTB-008	568	163aa	ENSP00000407473.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A1E282 C9JTX5 C9JZR7 E7EVS6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000414620.1	ACTB-010	561	80aa	ENSP00000401032.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JTX5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000417101.1	ACTB-012	472	99aa	ENSP00000399487.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JTX5 C9JUM1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000425660.1	ACTB-002	1845	125aa	ENSP00000409264.1	Nonsense mediated decay		C9JTX5 C9JZR7 G5E9R0	-	-
ENST00000464611.1	ACTB-013	715	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000473257.1	ACTB-011	556	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000462494.1	ACTB-003	2245	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000493945.1	ACTB-004	1236	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000484841.1	ACTB-005	1032	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000477812.1	ACTB-007	820	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000480301.1	ACTB-006	657	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 1,917 bps, Translation length: 375 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P60709

CCDS

This transcript is a member of the Human CCDS set: CCDS5341

Version

ENST00000331789.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000059589 (version 4)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000331789.5 ACTB-001

Summary