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Human (GRCh37.p13)
Description

sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A [Source:HGNC Symbol;Acc:10723]

Gene Synonyms

COLL1, HH16, Hsema-I, Hsema-III, SEMA1, SEMAD, SEMAIII, SEMAL, SemD, coll-1

Location
About this transcript

This transcript has 17 exons, is annotated with 15 domains and features, is associated with 111179 variant alleles and maps to 741 oligo probes.

Gene
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeqFlags
ENST00000265362.4SEMA3A-0018225771aaENSP00000265362.3
 
Protein coding
CCDS5599C9J9C4 C9JD25 Q14563
Q75MQ2 Q86UJ2
NM_006080.2Ensembl CanonicalGENCODE basic
ENST00000436949.1SEMA3A-0082550771aaENSP00000415260.1
 
Protein coding
CCDS5599C9J9C4 C9JD25 Q14563
Q75MQ2 Q86UJ2
-GENCODE basic
ENST00000424555.1SEMA3A-00356819aaENSP00000404800.1
 
Protein coding
C9JD25 -CDS 3' incomplete
ENST00000420047.1SEMA3A-002553149aaENSP00000391900.1
 
Protein coding
C9J9C4 C9JD25 -CDS 3' incomplete
ENST00000448879.1SEMA3A-00553437aaENSP00000402093.1
 
Protein coding
C9JD25 Q14563 -CDS 3' incomplete
ENST00000471474.1SEMA3A-006688No protein-
 
Processed transcript
---
ENST00000490883.1SEMA3A-007237No protein-
 
Processed transcript
---
Statistics

Exons: 17, Coding exons: 17, Transcript length: 8,225 bps, Translation length: 771 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q14563

CCDS

This transcript is a member of the Human CCDS set: CCDS5599

Version

ENST00000265362.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:
OTTHUMT00000253355 (version 2)
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.