Transcript: ENST00000535731.1 LRP6-002

Description

low density lipoprotein receptor-related protein 6 [Source:HGNC Symbol;Acc:6698]

Gene Synonyms

ADCAD2

Location

Chromosome 12: 12,340,022-12,419,946 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 9 domains and features, is associated with 37265 variant alleles and maps to 111 oligo probes.

Gene

This transcript is a product of gene ENSG00000070018.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000261349.4	LRP6-001	10020	1613aa	ENSP00000261349.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8647	B3KQA9 F5H0Z3 O75581	NM_002336.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000543091.1	LRP6-004	4774	1568aa	ENSP00000442472.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H0Z3 F5H7J9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000540527.1	LRP6-006	593	69aa	ENSP00000443239.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YGH0	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000535731.1	LRP6-002	562	75aa	ENSP00000439765.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H0Z3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000538239.1	LRP6-003	7812	1478aa	ENSP00000445083.1	Nonsense mediated decay		B3KQA9 F5H0Z3	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000540415.1	LRP6-005	473	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000545658.1	LRP6-007	435	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 562 bps, Translation length: 75 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000535731.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000400143 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000535731.1 LRP6-002

Summary