Transcript: ENST00000393842.1 ATP2B3-004

Description

ATPase, Ca++ transporting, plasma membrane 3 [Source:HGNC Symbol;Acc:816]

Gene Synonyms

PMCA3, PMCA3a, SCAX1

Location

Chromosome X: 152,798,392-152,835,420 forward strand.

About this transcript

This transcript has 20 exons, is annotated with 42 domains and features, is associated with 12846 variant alleles and maps to 496 oligo probes.

Gene

This transcript is a product of gene ENSG00000067842.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000370186.1	ATP2B3-001	6742	1159aa	ENSP00000359205.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q16720	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000370181.2	ATP2B3-202	6532	1159aa	ENSP00000359200.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q16720	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000263519.4	ATP2B3-201	6420	1220aa	ENSP00000263519.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS35440	A1L3B5 Q16720	NM_001001344.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000349466.2	ATP2B3-002	4280	1220aa	ENSP00000343886.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS35440	A1L3B5 Q16720	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000359149.3	ATP2B3-006	4234	1173aa	ENSP00000352062.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14722	A1L3B5 Q16720	NM_021949.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000393842.1	ATP2B3-004	4064	1154aa	ENSP00000377425.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q16720	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000460549.1	ATP2B3-003	899	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000496610.1	ATP2B3-005	634	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 20, Coding exons: 19, Transcript length: 4,064 bps, Translation length: 1,154 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q16720

Version

ENST00000393842.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000060959 (version 4)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000393842.1 ATP2B3-004

Summary