Transcript: ENST00000522878.1 ARFGEF1-010

Description

ADP-ribosylation factor guanine nucleotide-exchange factor 1 (brefeldin A-inhibited) [Source:HGNC Symbol;Acc:15772]

Gene Synonyms

ARFGEP1, BIG1, DKFZP434L057, P200, p200

Location

Chromosome 8: 68,087,722-68,123,764 reverse strand.

About this transcript

This transcript has 6 exons, is associated with 16225 variant alleles and maps to 175 oligo probes.

Gene

This transcript is a product of gene ENSG00000066777.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000262215.3	ARFGEF1-001	7225	1849aa	ENSP00000262215.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6199	B3KMS9 E5RHZ1 E5RJB2 E5RJN9 Q9Y6D6	NM_006421.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000520381.1	ARFGEF1-003	5876	1254aa	ENSP00000428429.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RIF2 E5RJB2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000518230.1	ARFGEF1-007	2718	702aa	ENSP00000430891.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RHL7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000518789.1	ARFGEF1-006	750	155aa	ENSP00000429560.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RHZ1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000519436.1	ARFGEF1-002	571	118aa	ENSP00000429002.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RJN9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000517631.1	ARFGEF1-011	399	122aa	ENSP00000429138.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RJB2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000517955.1	ARFGEF1-009	1235	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000522878.1	ARFGEF1-010	646	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000518290.1	ARFGEF1-005	3179	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 646 bps,

Version

ENST00000522878.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000380486 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000522878.1 ARFGEF1-010

Summary