Transcript: ENST00000395067.2 MSANTD3-001

Description

Myb/SANT-like DNA-binding domain containing 3 [Source:HGNC Symbol;Acc:23370]

Gene Synonyms

C9orf30, MGC17337

Location

About this transcript

This transcript has 3 exons, is annotated with 5 domains and features, is associated with 9987 variant alleles and maps to 258 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000395067.2	MSANTD3-001	1362	275aa	ENSP00000378506.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6749	Q96H12	NM_080655.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000374885.1	MSANTD3-003	786	159aa	ENSP00000364020.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56579	Q96H12	NM_001198807.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000398977.2	MSANTD3-005	780	134aa	ENSP00000415830.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000374886.3	MSANTD3-004	710	181aa	ENSP00000364021.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000489377.1	MSANTD3-002	1991	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 1,362 bps, Translation length: 275 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96H12

CCDS

This transcript is a member of the Human CCDS set: CCDS6749

Version

ENST00000395067.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000053410 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.