Transcript: ENST00000375759.3 SPEN-001

Description

spen family transcriptional repressor [Source:HGNC Symbol;Acc:17575]

Gene Synonyms

HIAA0929, KIAA0929, MINT, RBM15C, SHARP

Location

About this transcript

This transcript has 15 exons, is annotated with 58 domains and features, is associated with 44100 variant alleles and maps to 788 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000375759.3	SPEN-001	12232	3664aa	ENSP00000364912.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS164	Q96T58	NM_015001.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000438066.1	SPEN-002	1733	373aa	ENSP00000388021.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F6WRY4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000442985.1	SPEN-004	891	297aa	ENSP00000400914.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000471538.1	SPEN-003	1404	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000487496.1	SPEN-005	543	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 15, Coding exons: 15, Transcript length: 12,232 bps, Translation length: 3,664 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96T58

CCDS

This transcript is a member of the Human CCDS set: CCDS164

Version

ENST00000375759.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000025993 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.