Transcript: ENST00000489923.1 PDIA5-002

Description

protein disulfide isomerase family A, member 5 [Source:HGNC Symbol;Acc:24811]

Gene Synonyms

FLJ30401, PDIR, hsa-mir-7110

Location

About this transcript

This transcript has 16 exons, is annotated with 13 domains and features, is associated with 39845 variant alleles and maps to 726 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000316218.7	PDIA5-001	1799	519aa	ENSP00000323313.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3020	C9JY10 Q14554	NM_006810.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000484644.1	PDIA5-004	667	64aa	ENSP00000419946.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JY10	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000489923.1	PDIA5-002	1651	262aa	ENSP00000417520.1	Nonsense mediated decay		C9JY10 Q9BV43	-	-
ENST00000469649.1	PDIA5-008	722	83aa	ENSP00000417199.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000467157.1	PDIA5-003	2232	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000495004.1	PDIA5-005	563	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000485208.1	PDIA5-007	499	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000472319.1	PDIA5-006	395	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 16, Coding exons: 11, Transcript length: 1,651 bps, Translation length: 262 residues

Version

ENST00000489923.1

Type

Nonsense mediated decay

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000356193 (version 1)