Transcript: ENST00000251289.5 WDR18-001

Description

WD repeat domain 18 [Source:HGNC Symbol;Acc:17956]

Gene Synonyms

Ipi3, R32184_1

Location

Chromosome 19: 984,331-994,569 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 24 domains and features, is associated with 6757 variant alleles and maps to 398 oligo probes.

Gene

This transcript is a product of gene ENSG00000065268.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000251289.5	WDR18-001	1548	432aa	ENSP00000251289.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12051	Q9BV38	NM_024100.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000587001.2	WDR18-004	1462	409aa	ENSP00000464855.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EIR0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000607440.1	WDR18-011	1394	394aa	ENSP00000475744.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000590354.2	WDR18-008	659	41aa	ENSP00000475953.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		U3KQK3	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000591985.2	WDR18-002	1502	268aa	ENSP00000466551.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000585809.1	WDR18-006	879	189aa	ENSP00000476117.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000590397.1	WDR18-005	785	20aa	ENSP00000465826.2	Nonsense mediated decay		K7EKX5	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000591997.1	WDR18-009	617	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000586317.1	WDR18-010	831	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000591276.1	WDR18-007	607	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000591155.1	WDR18-003	417	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 1,548 bps, Translation length: 432 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9BV38

CCDS

This transcript is a member of the Human CCDS set: CCDS12051

Version

ENST00000251289.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000458225 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000251289.5 WDR18-001

Summary