Transcript: ENST00000485973.1 CALCRL-009

Description

calcitonin receptor-like [Source:HGNC Symbol;Acc:16709]

Gene Synonyms

CGRPR, CRLR

Location

Chromosome 2: 188,252,126-188,312,980 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 23693 variant alleles and maps to 116 oligo probes.

Gene

This transcript is a product of gene ENSG00000064989.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000409998.1	CALCRL-002	5223	461aa	ENSP00000386972.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2293	B8ZZJ4 E7EN01 Q16602	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392370.3	CALCRL-001	5155	461aa	ENSP00000376177.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2293	B8ZZJ4 E7EN01 Q16602	NM_005795.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000410068.1	CALCRL-004	1984	461aa	ENSP00000387190.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2293	B8ZZJ4 E7EN01 Q16602	NM_001271751.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000447403.1	CALCRL-006	642	77aa	ENSP00000415626.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B8ZZJ4 E7EN01	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000410102.1	CALCRL-005	591	37aa	ENSP00000386599.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B8ZZJ4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000479784.1	CALCRL-003	729	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000474212.1	CALCRL-008	588	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000461244.1	CALCRL-007	569	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000485973.1	CALCRL-009	573	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 573 bps,

Version

ENST00000485973.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000334655 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000485973.1 CALCRL-009

Summary