Transcript: ENST00000263966.3 USP13-001

Description

ubiquitin specific peptidase 13 (isopeptidase T-3) [Source:HGNC Symbol;Acc:12611]

Gene Synonyms

ISOT3, IsoT-3

Location

About this transcript

This transcript has 21 exons, is annotated with 29 domains and features, is associated with 56513 variant alleles and maps to 925 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000263966.3	USP13-001	8323	863aa	ENSP00000263966.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3235	Q92995	NM_003940.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000496897.1	USP13-003	2747	798aa	ENSP00000417146.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q92995	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000497155.1	USP13-006	899	299aa	ENSP00000420057.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C5J3	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000497380.1	USP13-005	509	75aa	ENSP00000418651.1	Nonsense mediated decay		H7C502	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000482333.1	USP13-002	1966	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 21, Coding exons: 21, Transcript length: 8,323 bps, Translation length: 863 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q92995

CCDS

This transcript is a member of the Human CCDS set: CCDS3235

Version

ENST00000263966.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000349617 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.