Transcript: ENST00000346342.3 F7-002

Description

coagulation factor VII (serum prothrombin conversion accelerator) [Source:HGNC Symbol;Acc:3544]

Gene Synonyms

SPCA

Location

About this transcript

This transcript has 8 exons, is annotated with 42 domains and features, is associated with 9557 variant alleles and maps to 490 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000375581.3	F7-001	3109	466aa	ENSP00000364731.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9528	A3RKG7 P08709 Q9UMU6	NM_000131.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000346342.3	F7-002	2409	444aa	ENSP00000329546.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9529	A3RKG7 P08709 Q9UMU6	NM_019616.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000541084.1	F7-201	1308	397aa	ENSP00000442051.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A3RKG7 F5H8B0 Q9UMU6	NM_001267554.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000444337.1	F7-004	564	74aa	ENSP00000387669.1	Nonsense mediated decay		E9PH36 Q9UMU6	-	-
ENST00000473085.1	F7-005	558	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000479674.1	F7-003	767	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 2,409 bps, Translation length: 444 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P08709

CCDS

This transcript is a member of the Human CCDS set: CCDS9529

Version

ENST00000346342.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000045839 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.