Transcript: ENST00000340811.4 PKP2-001

Description

plakophilin 2 [Source:HGNC Symbol;Acc:9024]

Gene Synonyms

ARVD9

Location

Chromosome 12: 32,943,679-33,049,774 reverse strand.

About this transcript

This transcript has 13 exons, is annotated with 18 domains and features, is associated with 45143 variant alleles and maps to 655 oligo probes.

Gene

This transcript is a product of gene ENSG00000057294.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000340811.4	PKP2-001	4302	837aa	ENSP00000342800.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31771	Q99959	NM_001005242.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000070846.6	PKP2-002	4241	881aa	ENSP00000070846.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8731	Q99959	NM_004572.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000546741.1	PKP2-003	589	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000552612.1	PKP2-005	901	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000546769.1	PKP2-007	782	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000546498.1	PKP2-004	589	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000549461.1	PKP2-006	566	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 4,302 bps, Translation length: 837 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q99959

CCDS

This transcript is a member of the Human CCDS set: CCDS31771

Version

ENST00000340811.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000404448 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000340811.4 PKP2-001

Summary