Transcript: ENST00000265069.8 ZFR-001

Description

zinc finger RNA binding protein [Source:HGNC Symbol;Acc:17277]

Gene Synonyms

ZFR1

Location

About this transcript

This transcript has 20 exons, is annotated with 33 domains and features, is associated with 41596 variant alleles and maps to 983 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000265069.8	ZFR-001	4738	1074aa	ENSP00000265069.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34139	B3KP82 Q96KR1	NM_016107.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000507465.1	ZFR-004	1140	182aa	ENSP00000422300.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000510369.1	ZFR-005	1551	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000514356.1	ZFR-006	3109	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000502988.1	ZFR-007	2184	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000505366.1	ZFR-002	1159	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000505204.1	ZFR-008	552	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 20, Coding exons: 20, Transcript length: 4,738 bps, Translation length: 1,074 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96KR1

CCDS

This transcript is a member of the Human CCDS set: CCDS34139

Version

ENST00000265069.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000366586 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.