Transcript: ENST00000513006.1 THOC3-007

Description

THO complex 3 [Source:HGNC Symbol;Acc:19072]

Gene Synonyms

MGC5469, TEX1, THO3, hTREX45

Location

Chromosome 5: 175,388,368-175,395,271 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 7 domains and features, is associated with 3806 variant alleles and maps to 251 oligo probes.

Gene

This transcript is a product of gene ENSG00000051596.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000513482.1	THOC3-004	1796	327aa	ENSP00000422243.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6NZ53	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000265097.4	THOC3-001	1589	351aa	ENSP00000265097.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4397	Q96J01	NM_032361.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000505969.1	THOC3-008	683	56aa	ENSP00000424967.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000514861.1	THOC3-010	628	166aa	ENSP00000425039.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6REC9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000432305.2	THOC3-003	453	75aa	ENSP00000394166.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000515016.1	THOC3-002	250	57aa	ENSP00000425781.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YA11	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000514250.1	THOC3-009	649	13aa	ENSP00000427267.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000511062.1	THOC3-011	642	55aa	ENSP00000427029.1	Nonsense mediated decay		H0YAG7	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000513006.1	THOC3-007	602	105aa	ENSP00000421082.1	Nonsense mediated decay		D6RGZ2	-	-
ENST00000510300.1	THOC3-005	699	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000513118.1	THOC3-006	490	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 602 bps, Translation length: 105 residues

Version

ENST00000513006.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000371978 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000513006.1 THOC3-007

Summary