Transcript: ENST00000492973.1 TPR-007

Description

translocated promoter region, nuclear basket protein [Source:HGNC Symbol;Acc:12017]

Location

Chromosome 1: 186,294,651-186,295,352 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 366 variant alleles and maps to 60 oligo probes.

Gene

This transcript is a product of gene ENSG00000047410.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000367478.4	TPR-001	9708	2363aa	ENSP00000356448.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41446	P12270 Q9UE33	NM_003292.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000451586.1	TPR-003	515	150aa	ENSP00000408103.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5SWX9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000474852.1	TPR-002	2757	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000467810.1	TPR-008	581	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000481347.1	TPR-006	2727	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000491783.1	TPR-004	882	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000492973.1	TPR-007	453	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000469463.1	TPR-005	420	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 453 bps,

Version

ENST00000492973.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000086359 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000492973.1 TPR-007

Summary