Transcript: ENST00000046087.2 ZPBP-001

Description

zona pellucida binding protein [Source:HGNC Symbol;Acc:15662]

Gene Synonyms

SP38, ZPBP1

Location

About this transcript

This transcript has 8 exons, is annotated with 9 domains and features, is associated with 66178 variant alleles and maps to 398 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000046087.2	ZPBP-001	1213	351aa	ENSP00000046087.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5509	Q9BS86	NM_007009.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000419417.1	ZPBP-003	1095	350aa	ENSP00000402071.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55110	Q9BS86	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000450231.1	ZPBP-006	589	72aa	ENSP00000390054.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JIS7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000413331.1	ZPBP-004	491	75aa	ENSP00000414755.1	Nonsense mediated decay		F8WDW2	-	-
ENST00000491129.1	ZPBP-005	610	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000465922.1	ZPBP-002	546	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 1,213 bps, Translation length: 351 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9BS86

CCDS

This transcript is a member of the Human CCDS set: CCDS5509

Version

ENST00000046087.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000251374 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.