Transcript: ENST00000251871.3 MED17-001

Description

mediator complex subunit 17 [Source:HGNC Symbol;Acc:2375]

Gene Synonyms

ARC77, CRSP6, CRSP77, DRIP77, DRIP80, TRAP80

Location

Chromosome 11: 93,517,393-93,547,861 forward strand.

About this transcript

This transcript has 12 exons, is annotated with 3 domains and features, is associated with 14255 variant alleles and maps to 565 oligo probes.

Gene

This transcript is a product of gene ENSG00000042429.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000251871.3	MED17-001	4874	651aa	ENSP00000251871.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8295	E9PJZ4 Q9NVC6	NM_004268.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000530819.1	MED17-002	2278	145aa	ENSP00000434459.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9NVC6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000533359.1	MED17-003	847	231aa	ENSP00000431524.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PKQ4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000528786.1	MED17-012	530	143aa	ENSP00000433626.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PJZ4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000533133.1	MED17-004	2491	266aa	ENSP00000433090.1	Nonsense mediated decay		E9PJZ4 E9PM72	-	-
ENST00000533367.1	MED17-008	797	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000525026.1	MED17-011	2659	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000525613.1	MED17-009	2545	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000529626.1	MED17-010	1694	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000531920.1	MED17-007	964	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000507258.3	MED17-006	413	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 4,874 bps, Translation length: 651 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NVC6

CCDS

This transcript is a member of the Human CCDS set: CCDS8295

Version

ENST00000251871.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000394800 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000251871.3 MED17-001

Summary