Transcript: ENST00000358933.5 EDC4-001

Description

enhancer of mRNA decapping 4 [Source:HGNC Symbol;Acc:17157]

Gene Synonyms

GE1, Ge-1, HEDL5, HEDLS, RCD-8, RCD8

Location

Chromosome 16: 67,906,926-67,918,406 forward strand.

About this transcript

This transcript has 29 exons, is annotated with 18 domains and features, is associated with 5701 variant alleles and maps to 910 oligo probes.

Gene

This transcript is a product of gene ENSG00000038358.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000358933.5	EDC4-001	4800	1401aa	ENSP00000351811.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10849	Q6P2E9	NM_014329.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000577105.1	EDC4-014	580	135aa	ENSP00000459624.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000575033.1	EDC4-013	530	176aa	ENSP00000460563.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L3M2	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000573985.1	EDC4-015	482	154aa	ENSP00000458357.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L0V0	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000574770.1	EDC4-005	1425	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000572221.1	EDC4-002	5267	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000573992.1	EDC4-004	3934	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000536072.2	EDC4-003	2375	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000575514.1	EDC4-011	1016	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000577028.1	EDC4-009	747	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000576972.1	EDC4-010	747	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000572031.1	EDC4-007	584	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000575507.1	EDC4-012	570	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000572724.1	EDC4-008	516	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 29, Coding exons: 29, Transcript length: 4,800 bps, Translation length: 1,401 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6P2E9

CCDS

This transcript is a member of the Human CCDS set: CCDS10849

Version

ENST00000358933.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000268874 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000358933.5 EDC4-001

Summary