Transcript: ENST00000504374.1 NSUN2-005

Description

NOP2/Sun RNA methyltransferase family, member 2 [Source:HGNC Symbol;Acc:25994]

Gene Synonyms

FLJ20303, MISU, MRT5, Misu, SAKI, TRM4

Location

Chromosome 5: 6,599,353-6,633,404 reverse strand.

About this transcript

This transcript has 18 exons, is annotated with 5 domains and features, is associated with 17383 variant alleles and maps to 761 oligo probes.

Gene

This transcript is a product of gene ENSG00000037474.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000264670.6	NSUN2-001	3303	767aa	ENSP00000264670.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3869	G3V1R4 Q08J23	NM_017755.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000539938.1	NSUN2-201	3217	531aa	ENSP00000444338.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V1R4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000506139.1	NSUN2-004	2619	732aa	ENSP00000420957.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54832	G3V1R4 Q08J23	NM_001193455.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000504374.1	NSUN2-005	3217	202aa	ENSP00000421783.1	Nonsense mediated decay		D6RAS3	-	-
ENST00000514127.1	NSUN2-006	614	102aa	ENSP00000426459.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000505264.1	NSUN2-007	472	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000505892.1	NSUN2-003	3558	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000513888.1	NSUN2-002	1290	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000507888.1	NSUN2-008	715	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000502932.1	NSUN2-009	512	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 18, Coding exons: 6, Transcript length: 3,217 bps, Translation length: 202 residues

Version

ENST00000504374.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000365826 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000504374.1 NSUN2-005

Summary