Transcript: ENST00000542892.1 ZCCHC8-008

Description

zinc finger, CCHC domain containing 8 [Source:HGNC Symbol;Acc:25265]

Gene Synonyms

DKFZp434E2220

Location

Chromosome 12: 122,958,487-122,965,969 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 5 domains and features, is associated with 3204 variant alleles and maps to 238 oligo probes.

Gene

This transcript is a product of gene ENSG00000033030.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq	Flags
ENST00000543897.1	ZCCHC8-002	4393	469aa	ENSP00000438993.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F5GXQ6 F5GYI9 F5H6J5 F5H803 Q6NZY4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000536306.1	ZCCHC8-003	2904	469aa	ENSP00000441423.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F5GXQ6 F5GYI9 F5H6J5 F5H803 Q6NZY4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000336229.4	ZCCHC8-201	2862	707aa	ENSP00000337313.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F5GXQ6 F5GYI9 F5H6J5 F5H803 Q6NZY4	NM_017612.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000538116.1	ZCCHC8-005	1829	318aa	ENSP00000440028.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F5GXQ6 F5H803	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000542892.1	ZCCHC8-008	1774	171aa	ENSP00000443818.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F5H803	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000544054.1	ZCCHC8-007	1561	211aa	ENSP00000441112.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F5GX80 F5GYI9 F5H6J5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000536663.1	ZCCHC8-006	1252	185aa	ENSP00000437578.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F5GYI9 F5H6J5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000540586.1	ZCCHC8-004	1250	38aa	ENSP00000440234.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F5GYI9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000538493.1	ZCCHC8-009	1142	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000546149.1	ZCCHC8-010	657	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 1,774 bps, Translation length: 171 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000542892.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000401470 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000542892.1 ZCCHC8-008

Summary